Gene: Solyc08g007560.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc08g007560.1
Transcript Identifier
Solyc08g007560.1.1
Gene Type
Coding gene
Location
SL2.50ch08 : 2106197-2107409 : positive

Family

Gene family
HOM04M000106
(802 genes in 27 species)
specific family
Subfamily
ORTHO04M000265
(291 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
AT-hook DNA-binding protein (Fragment) (AHRD V1 *--* A1DR81_CATRO); contains Interpro domain(s) IPR014476 Predicted AT-hook DNA-binding

Identifiers

Type Value
idSolyc08g007560.1.ITAG2.4
pacid36150610
tidSolyc08g007560.1.1.ITAG2.4
tidSolyc08g007560.1.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT2G45430
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT3G60870
GO:0009647 IEAPLAZA Integrative OrthologyskotomorphogenesisAT2G45430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042826 IEAPLAZA Integrative Orthologyhistone deacetylase bindingAT2G45430
GO:0003680 IEAPLAZA Integrative OrthologyAT DNA bindingAT2G45430
GO:0043621 IEAPLAZA Integrative Orthologyprotein self-associationAT2G45430

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G45430

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005175PPC domain
IPR014476AT-hook motif nuclear-localized protein

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.