Gene: Solyc07g065090.1 (Solanum lycopersicum)

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Gene Identifier
Solyc07g065090.1
Transcript Identifier
Solyc07g065090.1.1
Gene Type
Coding gene
Location
SL2.50ch07 : 66998756-66999739 : negative

Family

Gene family
HOM04M000908
(150 genes in 25 species)
specific family

Descriptions

Description
Polygalacturonase inhibitor protein (AHRD V1 ***- Q40160_SOLLC); contains Interpro domain(s) IPR013210 Leucine-rich repeat, N-terminal

Identifiers

Type Value
idSolyc07g065090.1.ITAG2.4
pacid36161651
tidSolyc07g065090.1.1.ITAG2.4
tidSolyc07g065090.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT3G12145
GO:0048574 IEAPLAZA Integrative Orthologylong-day photoperiodism, floweringAT3G12145
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT3G12145
GO:0048833 IEAPLAZA Tree-based Orthologyspecification of floral organ numberLOC_Os07g38130
GO:0080167 IEAPLAZA Tree-based Orthologyresponse to karrikinAT1G33590
GO:0007165 IEAPLAZA Integrative Orthologysignal transductionAT5G06870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0004857 IEAPLAZA Tree-based Orthologyenzyme inhibitor activityLOC_Os07g38130
GO:0008134 IEAPLAZA Integrative Orthologytranscription factor bindingAT3G12145
GO:0090353 IEAPLAZA Integrative Orthologypolygalacturonase inhibitor activityAT5G06870

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT1G33600
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G06870
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G12145
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT5G06870
GO:0048471 IEAPLAZA Integrative Orthologyperinuclear region of cytoplasmAT3G12145
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastAT1G33590
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G12145
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G12145
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT5G06870
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT5G06860

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR032675Leucine-rich repeat domain, L domain-like
IPR001611Leucine-rich repeat
IPR013210Leucine-rich repeat-containing N-terminal, plant-type

Mapman id Description
26.8.3.4.External stimuli response.pathogen.defense mechanisms.pathogen polygalacturonase inhibitor (PGIP)
No SignalP domains detected for this gene.