Gene: Solyc07g064890.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc07g064890.1
Transcript Identifier
Solyc07g064890.1.1
Gene Type
Coding gene
Location
SL2.50ch07 : 66870950-66871672 : positive

Family

Gene family
HOM04M000008
(3579 genes in 29 species)
specific family
Subfamily
ORTHO04M000003
(3095 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Ethylene responsive transcription factor 3a (AHRD V1 **** C0J9I5_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding

Identifiers

Type Value
idSolyc07g064890.1.ITAG2.4
pacid36162239
tidSolyc07g064890.1.1.ITAG2.4
tidSolyc07g064890.1.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009723 IDAGene Ontologyresponse to ethylene1
GO:0009733 IDAGene Ontologyresponse to auxin1
GO:0010104 IDAGene Ontologyregulation of ethylene-activated signaling pathway1
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT3G20310
GO:0009873 IEAPLAZA Integrative Orthologyethylene-activated signaling pathwayAT3G20310
GO:0010105 IEAPLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathwayAT1G50640
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT1G50640
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT3G20310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G50640
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT3G20310
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G50640

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT3G20310
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G50640

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
15.5.7.1.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)
No SignalP domains detected for this gene.