Gene: Solyc07g054980.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc07g054980.1
Transcript Identifier
Solyc07g054980.1.1
Gene Type
Coding gene
Location
SL2.50ch07 : 63133145-63137020 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Subfamily
ORTHO04M015874
(4 genes in 1 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Myb-related transcription factor (AHRD V1 *--- B5RHV2_MUSBA); contains Interpro domain(s) IPR015495 Myb transcription factor

Identifiers

Type Value
idSolyc07g054980.1.ITAG2.4
pacid36162276
tidSolyc07g054980.1.1.ITAG2.4
tidSolyc07g054980.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030154 IBAUniProtcell differentiation
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.