Gene: Solyc07g053740.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc07g053740.1
Transcript Identifier
Solyc07g053740.1.1
Gene Type
Coding gene
Location
SL2.50ch07 : 62167919-62168596 : positive

Family

Gene family
HOM04M000008
(3579 genes in 29 species)
specific family
Subfamily
ORTHO04M000003
(3095 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding

Identifiers

Type Value
idSolyc07g053740.1.ITAG2.4
pacid36161320
tidSolyc07g053740.1.1.ITAG2.4
tidSolyc07g053740.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009723 IDAGene Ontologyresponse to ethylene1
GO:0009733 IDAGene Ontologyresponse to auxin1
GO:0010104 IEPGene Ontologyregulation of ethylene-activated signaling pathway1
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009873 IEAPLAZA Integrative Orthologyethylene-activated signaling pathwayAT5G44210
GO:0019760 IEAPLAZA Integrative Orthologyglucosinolate metabolic processAT5G44210
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT5G44210

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G44210

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT5G44210
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT5G44210

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
15.5.7.1.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)
No SignalP domains detected for this gene.