Gene: Solyc07g053650.2 (Solanum lycopersicum)

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Gene Identifier
Solyc07g053650.2
Transcript Identifier
Solyc07g053650.2.1
Gene Type
Coding gene
Location
SL2.50ch07 : 62096478-62106822 : positive

Family

Gene family
HOM04M002394
(67 genes in 29 species)
specific family
Subfamily
ORTHO04M003984
(50 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
26S proteasome regulatory subunit (AHRD V1 ***- A8J3A4_CHLRE); contains Interpro domain(s) IPR016643 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit

Identifiers

Type Value
idSolyc07g053650.2.ITAG2.4
pacid36160086
tidSolyc07g053650.2.1.ITAG2.4
tidSolyc07g053650.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042176 IEAInterProregulation of protein catabolic process
GO:0030163 IEAPLAZA Integrative Orthologyprotein catabolic processAT4G28470
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT2G20580
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT2G20580
GO:0045087 IEAPLAZA Integrative Orthologyinnate immune responseAT2G20580
GO:0051726 IEAPLAZA Integrative Orthologyregulation of cell cycleAT2G20580

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030234 IEAInterProenzyme regulator activity
GO:0005488 IEAInterProbinding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G20580
GO:0043130 IEAPLAZA Integrative Orthologyubiquitin bindingAT2G20580

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000502 IEAInterProproteasome complex
GO:0008540 IEAPLAZA Integrative Orthologyproteasome regulatory particle, base subcomplexAT4G28470
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT4G28470
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT4G28470
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT4G28470
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G28470
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G20580
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G20580
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT2G20580
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT2G20580
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G20580

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011989Armadillo-like helical
IPR01664326S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit
IPR002015Proteasome/cyclosome repeat
IPR016024Armadillo-type fold

Mapman id Description
19.2.6.2.2.1.Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN1
No SignalP domains detected for this gene.