Gene: Solyc07g053630.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc07g053630.2
Transcript Identifier
Solyc07g053630.2.1
Gene Type
Coding gene
Location
SL2.50ch07 : 62062754-62066811 : negative

Family

Gene family
HOM04M000161
(554 genes in 29 species)
specific family
Subfamily
ORTHO04M002829
(63 genes in 27 species)
specific family

Descriptions

Description
Response regulator (AHRD V1 *--- A1A6A6_ORYSJ); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF class

Identifiers

Type Value
idSolyc07g053630.2.ITAG2.4
pacid36161526
tidSolyc07g053630.2.1.ITAG2.4
tidSolyc07g053630.2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G44190
GO:0007165 IEAPLAZA Integrative Orthologysignal transductionAT2G20570
GO:1900056 IEAPLAZA Integrative Orthologynegative regulation of leaf senescenceAT5G44190
GO:0000160 IEAPLAZA Homology (enrichment)phosphorelay signal transduction system
GO:0010380 IEAPLAZA Integrative Orthologyregulation of chlorophyll biosynthetic processAT5G44190
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT5G44190
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT5G44190

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT2G20570
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G44190
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT2G20570

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G44190

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like
IPR006447Myb domain, plants

Mapman id Description
15.5.2.3.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (GARP)
No SignalP domains detected for this gene.