Gene: Solyc07g047940.2 (Solanum lycopersicum)

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Gene Identifier
Solyc07g047940.2
Transcript Identifier
Solyc07g047940.2.1
Gene Type
Coding gene
Location
SL2.50ch07 : 59147051-59149538 : positive

Family

Gene family
HOM04M000612
(204 genes in 27 species)
specific family
Subfamily
ORTHO04M002426
(70 genes in 25 species)
specific family

Descriptions

Description
Zinc finger CCCH domain-containing protein 18 (AHRD V1 ***- C3H18_ARATH); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1

Identifiers

Type Value
idSolyc07g047940.2.ITAG2.4
pacid36162256
tidSolyc07g047940.2.1.ITAG2.4
tidSolyc07g047940.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009408 ISSGene Ontologyresponse to heat1
GO:0071537 ISSGene OntologyC3HC4-type RING finger domain-mediated complex assembly1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0046872 IEAInterPrometal ion binding
GO:0003729 IEAPLAZA Tree-based OrthologymRNA bindingAT3G51950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT3G52980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034365AtC3H46-like, RNA recognition motif
IPR000504RNA recognition motif domain
IPR025605OST-HTH/LOTUS domain
IPR032297Torus domain
IPR000571Zinc finger, CCCH-type

Mapman id Description
15.5.16.RNA biosynthesis.transcriptional regulation.transcription factor (C3H-ZF)
No SignalP domains detected for this gene.