Gene: Solyc06g072040.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc06g072040.1
Transcript Identifier
Solyc06g072040.1.1
Gene Type
Coding gene
Location
SL2.50ch06 : 44398375-44399073 : negative

Family

Gene family
HOM04M000438
(263 genes in 29 species)
specific family
Subfamily
ORTHO04M000431
(215 genes in 29 species)
specific family

Descriptions

Description
Nuclear transcription factor Y subunit C-1 (AHRD V1 **** B6SWV5_MAIZE); contains Interpro domain(s) IPR003958 Transcription factor CBF/NF-Y/archaeal histone

Identifiers

Type Value
idSolyc06g072040.1.ITAG2.4
pacid36128552
tidSolyc06g072040.1.1.ITAG2.4
tidSolyc06g072040.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009414 IEPGene Ontologyresponse to water deprivation1
GO:0010029 IEAPLAZA Integrative Orthologyregulation of seed germinationAT5G63470
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT5G63470
GO:0048586 IEAPLAZA Integrative Orthologyregulation of long-day photoperiodism, floweringAT5G63470
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT5G63470
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT3G48590
GO:2000905 IEAPLAZA Integrative Orthologynegative regulation of starch metabolic processAT5G63470
GO:2000306 IEAPLAZA Integrative Orthologypositive regulation of photomorphogenesisAT5G63470
GO:0009738 IEAPLAZA Integrative Orthologyabscisic acid-activated signaling pathwayAT5G63470
GO:0051247 IEAPLAZA Integrative Orthologypositive regulation of protein metabolic processAT5G63470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046982 IEAInterProprotein heterodimerization activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G63470

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G63470
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G63470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072Histone-fold

Mapman id Description
15.5.51.3.RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YC
No SignalP domains detected for this gene.