Gene: Solyc06g053610.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc06g053610.2
Transcript Identifier
Solyc06g053610.2.1
Gene Type
Coding gene
Location
SL2.50ch06 : 36428928-36431666 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Myb-related transcription factor (AHRD V1 **-* A7ULI0_DATME); contains Interpro domain(s) IPR017930 Myb-type HTH DNA-binding domain

Identifiers

Type Value
idSolyc06g053610.2.ITAG2.4
pacid36129951
tidSolyc06g053610.2.1.ITAG2.4
tidSolyc06g053610.2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT3G23250
GO:0050826 IEAPLAZA Integrative Orthologyresponse to freezingAT2G31180
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT2G31180
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT1G06180
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G31180
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT3G23250
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT3G23250
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT2G31180
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G23250
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT3G23250
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT3G23250

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT2G31180

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G31180

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.