Gene: Solyc05g056620.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc05g056620.1
Transcript Identifier
Solyc05g056620.1.1
Gene Type
Coding gene
Location
SL2.50ch05 : 5217073-5222359 : negative

Family

Gene family
HOM04M000038
(1510 genes in 29 species)
specific family
Subfamily
ORTHO04M000013
(1412 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Macrocalyx (mc) Myocyte-specific enhancer factor 2D (AHRD V1 *-*- MEF2D_HUMAN); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box

Identifiers

Type Value
idSolyc05g056620.1.ITAG2.4
pacid36146321
tidSolyc05g056620.1.1.ITAG2.4
tidSolyc05g056620.1.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045944 IEAInterPropositive regulation of transcription from RNA polymerase II promoter
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009911 IEAPLAZA Integrative Orthologypositive regulation of flower developmentAT1G26310
GO:0010582 IEAPLAZA Integrative Orthologyfloral meristem determinacyAT1G26310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000977 IEAInterProRNA polymerase II regulatory region sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0046983 IEAInterProprotein dimerization activity
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G26310

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033896MADS MEF2-like
IPR002100Transcription factor, MADS-box
IPR002487Transcription factor, K-box

Mapman id Description
15.5.14.RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)
No SignalP domains detected for this gene.