Gene: Solyc05g050980.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc05g050980.2
Transcript Identifier
Solyc05g050980.2.1
Gene Type
Coding gene
Location
SL2.50ch05 : 61190864-61197427 : positive

Family

Gene family
HOM04M004047
(44 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
3-phosphoshikimate 1-carboxyvinyltransferase (AHRD V1 **** Q30CZ8_FAGSY); contains Interpro domain(s) IPR001986 3-phosphoshikimate 1-carboxyvinyltransferase, core

Identifiers

Type Value
idSolyc05g050980.2.ITAG2.4
pacid36144466
tidSolyc05g050980.2.1.ITAG2.4
tidSolyc05g050980.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009073 IEAInterProaromatic amino acid family biosynthetic process
GO:0018920 IEAPLAZA Integrative Orthologyglyphosate metabolic processAT1G48860
GO:0033587 IEAPLAZA Tree-based Orthologyshikimate biosynthetic processLOC_Os06g04280
GO:0009423 IEAPLAZA Integrative Orthologychorismate biosynthetic processAT2G45300

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003866 IEAInterPro3-phosphoshikimate 1-carboxyvinyltransferase activity
GO:0016765 IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0003824 IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 IEAPLAZA Tree-based OrthologyplastidLOC_Os06g04280
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G48860
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT2G45300

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR0062643-phosphoshikimate 1-carboxyvinyltransferase
IPR001986Enolpyruvate transferase domain
IPR0231933-phosphoshikimate 1-carboxyvinyltransferase, conserved site
IPR013792RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta

Mapman id Description
4.1.5.1.5.Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.5-enolpyruvyl-shikimate 3-phosphate (EPSP) synthase
No SignalP domains detected for this gene.