Gene: Solyc05g009470.2 (Solanum lycopersicum)

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Gene Identifier
Solyc05g009470.2
Transcript Identifier
Solyc05g009470.2.1
Gene Type
Coding gene
Location
SL2.50ch05 : 3636307-3643815 : negative

Family

Gene family
HOM04M000549
(222 genes in 29 species)
specific family
Subfamily
ORTHO04M001314
(102 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Alpha-glucosidase (AHRD V1 **** Q9LEC9_SOLTU); contains Interpro domain(s) IPR000322 Glycoside hydrolase, family 31

Identifiers

Type Value
idSolyc05g009470.2.ITAG2.4
pacid36146163
tidSolyc05g009470.2.1.ITAG2.4
tidSolyc05g009470.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975 IEAInterProcarbohydrate metabolic process
GO:0045493 IEAPLAZA Integrative Orthologyxylan catabolic processAT1G68560
GO:0010214 IEAPLAZA Integrative Orthologyseed coat developmentAT1G68560
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G68560
GO:0010411 IEAPLAZA Integrative Orthologyxyloglucan metabolic processAT1G68560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004553 IEAInterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003824 IEAInterProcatalytic activity
GO:0030246 IEAInterProcarbohydrate binding
GO:0009044 IEAPLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activityAT1G68560
GO:0080176 IEAPLAZA Integrative Orthologyxyloglucan 1,6-alpha-xylosidase activityAT1G68560
GO:0046556 IEAPLAZA Integrative Orthologyalpha-L-arabinofuranosidase activityAT1G68560

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G68560
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT3G45940
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT1G68560
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT1G68560
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT1G68560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000322Glycoside hydrolase family 31
IPR025887Glycoside hydrolase family 31, N-terminal domain
IPR031727Galactose mutarotase, N-terminal barrel
IPR030458Glycosyl hydrolases family 31, active site
IPR017853Glycoside hydrolase superfamily
IPR011013Galactose mutarotase-like domain

Mapman id Description
21.2.1.2.5.Cell wall organisation.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase
No SignalP domains detected for this gene.