Gene: Solyc05g009220.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc05g009220.2
Transcript Identifier
Solyc05g009220.2.1
Gene Type
Coding gene
Location
SL2.50ch05 : 3360430-3369385 : positive

Family

Gene family
HOM04M001154
(123 genes in 29 species)
specific family
Subfamily
ORTHO04M003887
(50 genes in 29 species)
specific family

Descriptions

Description
Glutaminyl-tRNA synthetase (AHRD V1 ***- B6UC34_MAIZE); contains Interpro domain(s) IPR004514 Glutaminyl-tRNA synthetase, class Ic

Identifiers

Type Value
idSolyc05g009220.2.ITAG2.4
pacid36144623
tidSolyc05g009220.2.1.ITAG2.4
tidSolyc05g009220.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418 IEAInterProtRNA aminoacylation for protein translation
GO:0043039 IEAInterProtRNA aminoacylation
GO:0006425 IEAInterProglutaminyl-tRNA aminoacylation
GO:0006412 IEAInterProtranslation
GO:0048481 IEAPLAZA Integrative Orthologyplant ovule developmentAT1G25350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166 IEAInterPronucleotide binding
GO:0004812 IEAInterProaminoacyl-tRNA ligase activity
GO:0005524 IEAInterProATP binding
GO:0016876 IEAInterProligase activity, forming aminoacyl-tRNA and related compounds
GO:0004819 IEAInterProglutamine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G25350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020056Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR020061Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain
IPR020058Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR007639Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal
IPR020059Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
IPR007638Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain 2
IPR000924Glutamyl/glutaminyl-tRNA synthetase
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
IPR004514Glutamine-tRNA synthetase

Mapman id Description
17.2.6.Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamine-tRNA ligase
No SignalP domains detected for this gene.