Gene: Solyc05g007160.2 (Solanum lycopersicum)

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Gene Identifier
Solyc05g007160.2
Transcript Identifier
Solyc05g007160.2.1
Gene Type
Coding gene
Location
SL2.50ch05 : 1753269-1756952 : negative

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family
Subfamily
ORTHO04M007120
(34 genes in 24 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Transcription factor C-MYB (AHRD V1 *-** Q766Z9_ORYLA); contains Interpro domain(s) IPR015495 Myb transcription factor

Identifiers

Type Value
idSolyc05g007160.2.ITAG2.4
pacid36146276
tidSolyc05g007160.2.1.ITAG2.4
tidSolyc05g007160.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0032875 IEAPLAZA Integrative Orthologyregulation of DNA endoreduplicationAT2G02820
GO:0010444 IEAPLAZA Integrative Orthologyguard mother cell differentiationAT2G02820
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT2G02820
GO:0048527 IEAPLAZA Integrative Orthologylateral root developmentAT2G02820
GO:1901333 IEAPLAZA Integrative Orthologypositive regulation of lateral root developmentAT2G02820
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT2G02820
GO:1902584 IEAPLAZA Integrative Orthologypositive regulation of response to water deprivationAT2G02820
GO:0080022 IEAPLAZA Integrative Orthologyprimary root developmentAT1G14350
GO:0010052 IEAPLAZA Integrative Orthologyguard cell differentiationAT2G02820
GO:0061087 IEAPLAZA Integrative Orthologypositive regulation of histone H3-K27 methylationAT1G14350
GO:0010235 IEAPLAZA Integrative Orthologyguard mother cell cytokinesisAT2G02820
GO:2000037 IEAPLAZA Integrative Orthologyregulation of stomatal complex patterningAT2G02820
GO:0010376 IEAPLAZA Integrative Orthologystomatal complex formationAT2G02820
GO:0050891 IEAPLAZA Integrative Orthologymulticellular organismal water homeostasisAT2G02820
GO:0009926 IEAPLAZA Integrative Orthologyauxin polar transportAT1G14350
GO:0009629 IEAPLAZA Integrative Orthologyresponse to gravityAT2G02820
GO:1902806 IEAPLAZA Integrative Orthologyregulation of cell cycle G1/S phase transitionAT2G02820
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G14350
GO:0009553 IEAPLAZA Integrative Orthologyembryo sac developmentAT2G02820
GO:0009554 IEAPLAZA Integrative OrthologymegasporogenesisAT2G02820
GO:1901002 IEAPLAZA Integrative Orthologypositive regulation of response to salt stressAT2G02820
GO:0090436 IEAPLAZA Integrative Orthologyleaf pavement cell developmentAT1G14350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G14350
GO:0003723 IEAPLAZA Integrative OrthologyRNA bindingAT1G14350
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT2G02820
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT2G02820

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G02820
GO:0016592 IEAPLAZA Integrative Orthologymediator complexAT1G14350
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT1G14350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR017930Myb domain
IPR001005SANT/Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.