Gene: Solyc05g006430.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc05g006430.1
Transcript Identifier
Solyc05g006430.1.1
Gene Type
Coding gene
Location
SL2.50ch05 : 1066262-1068706 : positive

Family

Gene family
HOM04M000342
(321 genes in 28 species)
specific family
Subfamily
ORTHO04M000251
(301 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Formin 3 (AHRD V1 *-*- D0QAN4_ARATH); contains Interpro domain(s) IPR015425 Actin-binding FH2

Identifiers

Type Value
idSolyc05g006430.1.ITAG2.4
pacid36145603
tidSolyc05g006430.1.1.ITAG2.4
tidSolyc05g006430.1.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030036 IEAPLAZA Tree-based Orthologyactin cytoskeleton organizationAT3G25500
GO:0045010 IEAPLAZA Integrative Orthologyactin nucleationAT1G70140
GO:0051016 IEAPLAZA Tree-based Orthologybarbed-end actin filament cappingAT3G25500
GO:0009932 IEAPLAZA Integrative Orthologycell tip growthAT1G70140
GO:0009960 IEAPLAZA Tree-based Orthologyendosperm developmentAT5G54650
GO:0048317 IEAPLAZA Tree-based Orthologyseed morphogenesisAT5G54650
GO:0030041 IEAPLAZA Integrative Orthologyactin filament polymerizationAT1G24150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G24150
GO:0051015 IEAPLAZA Integrative Orthologyactin filament bindingAT1G70140
GO:0005522 IEAPLAZA Integrative Orthologyprofilin bindingAT1G70140

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005819 IEAPLAZA Tree-based OrthologyspindleAT5G67470
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT3G25500
GO:0005618 IEAPLAZA Tree-based Orthologycell wallAT5G54650
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT5G54650
GO:0005911 IEAPLAZA Integrative Orthologycell-cell junctionAT1G24150
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT5G67470
GO:0009524 IEAPLAZA Tree-based OrthologyphragmoplastAT5G54650
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G24150
GO:0005730 IEAPLAZA Tree-based OrthologynucleolusAT5G67470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015425Formin, FH2 domain

Mapman id Description
20.2.2.6.1.Cytoskeleton organisation.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-I formin
No SignalP domains detected for this gene.