Gene: Solyc04g081750.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc04g081750.2
Transcript Identifier
Solyc04g081750.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 65673325-65681681 : positive

Family

Gene family
HOM04M002623
(62 genes in 28 species)
specific family

Descriptions

Description
FYVE, RhoGEF and PH domain-containing protein 6 (AHRD V1 *--- FGD6_HUMAN); contains Interpro domain(s) IPR000306 Zinc finger, FYVE-type

Identifiers

Type Value
idSolyc04g081750.2.ITAG2.4
pacid36142401
tidSolyc04g081750.2.1.ITAG2.4
tidSolyc04g081750.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0036258 IEAPLAZA Integrative Orthologymultivesicular body assemblyAT1G20110
GO:0070676 IEAPLAZA Integrative Orthologyintralumenal vesicle formationAT1G20110
GO:0055072 IEAPLAZA Integrative Orthologyiron ion homeostasisAT1G20110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046872 IEAInterPrometal ion binding
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT1G20110
GO:0043130 IEAPLAZA Integrative Orthologyubiquitin bindingAT1G20110
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G20110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000813 IEAPLAZA Integrative OrthologyESCRT I complexAT1G20110
GO:0031902 IEAPLAZA Integrative Orthologylate endosome membraneAT1G20110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011993PH domain-like
IPR000306FYVE zinc finger
IPR017455Zinc finger, FYVE-related
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
22.5.4.3.7.Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.associated component FREE1
No SignalP domains detected for this gene.