Gene: Solyc04g081020.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc04g081020.2
Transcript Identifier
Solyc04g081020.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 65084026-65085209 : positive

Family

Gene family
HOM04M000450
(258 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Zinc finger protein CONSTANS-LIKE 3 (AHRD V1 *--- COL3_ARATH); contains Interpro domain(s) IPR000315 Zinc finger, B-box

Identifiers

Type Value
idSolyc04g081020.2.ITAG2.4
pacid36143209
tidSolyc04g081020.2.1.ITAG2.4
tidSolyc04g081020.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT4G39070
GO:1900458 IEAPLAZA Integrative Orthologynegative regulation of brassinosteroid mediated signaling pathwayAT4G39070
GO:0009641 IEAPLAZA Integrative Orthologyshade avoidanceAT1G75540
GO:0009741 IEAPLAZA Integrative Orthologyresponse to brassinosteroidAT4G39070
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT1G75540
GO:0080167 IEAPLAZA Integrative Orthologyresponse to karrikinAT4G39070
GO:2000306 IEAPLAZA Integrative Orthologypositive regulation of photomorphogenesisAT4G39070

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAInterProzinc ion binding
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G75540
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G75540

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAInterProintracellular

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR000315B-box-type zinc finger

Mapman id Description
15.5.1.1.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB)
No SignalP domains detected for this gene.