Gene: Solyc04g080820.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc04g080820.2
Transcript Identifier
Solyc04g080820.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 64892023-64897041 : negative

Family

Gene family
HOM04M000398
(285 genes in 27 species)
specific family
Subfamily
ORTHO04M000318
(264 genes in 27 species)
specific family

Descriptions

Description
Cytokinin oxidase/dehydrogenase (AHRD V1 **** C3VPM7_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding

Identifiers

Type Value
idSolyc04g080820.2.ITAG2.4
pacid36142593
tidSolyc04g080820.2.1.ITAG2.4
tidSolyc04g080820.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009735 IDAGene Ontologyresponse to cytokinin1
GO:0009733 IDAGene Ontologyresponse to auxin1
GO:0055114 IEAInterProoxidation-reduction process
GO:0009690 IEAInterProcytokinin metabolic process
GO:0010229 IEAPLAZA Tree-based Orthologyinflorescence developmentLOC_Os01g10110
GO:0022900 IEAPLAZA Tree-based Orthologyelectron transport chainLOC_Os01g10110
GO:0009823 IEAPLAZA Integrative Orthologycytokinin catabolic processAT1G75450
GO:0048507 IEAPLAZA Tree-based Orthologymeristem developmentAT2G41510
GO:0010103 IEAPLAZA Tree-based Orthologystomatal complex morphogenesisAT5G21482

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0050660 IEAInterProflavin adenine dinucleotide binding
GO:0016491 IEAInterProoxidoreductase activity
GO:0019139 IEAInterProcytokinin dehydrogenase activity
GO:0016614 IEAInterProoxidoreductase activity, acting on CH-OH group of donors
GO:0008131 IEAPLAZA Tree-based Orthologyprimary amine oxidase activityAT5G56970

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005788 IEAPLAZA Tree-based Orthologyendoplasmic reticulum lumenAT2G19500
GO:0005576 IEAPLAZA Integrative Orthologyextracellular regionAT1G75450
GO:0005773 IEAPLAZA Tree-based OrthologyvacuoleAT5G56970

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016170Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain
IPR016167FAD-binding, type 2, subdomain 1
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR006094FAD linked oxidase, N-terminal
IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
IPR006093Oxygen oxidoreductase covalent FAD-binding site
IPR016166FAD-binding, type 2
IPR016164FAD-linked oxidase-like, C-terminal

Mapman id Description
11.4.3.2.Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase
No SignalP domains detected for this gene.