Gene: Solyc04g078650.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc04g078650.2
Transcript Identifier
Solyc04g078650.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 63345126-63346467 : negative

Family

Gene family
HOM04M000433
(265 genes in 28 species)
specific family
Subfamily
ORTHO04M000524
(187 genes in 25 species)
specific family

Descriptions

Description
WUSCHEL-related homeobox-containing protein 4 (AHRD V1 ***- C0LAL8_9MAGN); contains Interpro domain(s) IPR001356 Homeobox

Identifiers

Type Value
idSolyc04g078650.2.ITAG2.4
pacid36143340
tidSolyc04g078650.2.1.ITAG2.4
tidSolyc04g078650.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010067 IMPGene Ontologyprocambium histogenesis1
GO:0016049 IEAPLAZA Tree-based Orthologycell growthAT2G01500
GO:0010865 IEAPLAZA Tree-based Orthologystipule developmentAT2G28610
GO:0048653 IEAPLAZA Tree-based Orthologyanther developmentAT2G17950
GO:0009942 IEAPLAZA Tree-based Orthologylongitudinal axis specificationAT5G59340
GO:0048825 IEAPLAZA Tree-based Orthologycotyledon developmentAT5G59340
GO:0009965 IEAPLAZA Tree-based Orthologyleaf morphogenesisAT2G01500
GO:0009943 IEAPLAZA Tree-based Orthologyadaxial/abaxial axis specificationAT2G28610
GO:0048446 IEAPLAZA Tree-based Orthologypetal morphogenesisAT2G01500
GO:0006355 IEAPLAZA Tree-based Orthologyregulation of transcription, DNA-templatedAT2G17950
GO:0080167 IEAPLAZA Tree-based Orthologyresponse to karrikinAT5G59340
GO:0080166 IEAPLAZA Tree-based Orthologystomium developmentAT2G17950
GO:0010072 IEAPLAZA Tree-based Orthologyprimary shoot apical meristem specificationAT1G20700
GO:0009880 IEAPLAZA Tree-based Orthologyembryonic pattern specificationAT5G59340
GO:0007165 IEAPLAZA Integrative Orthologysignal transductionAT1G46480
GO:0019827 IEAPLAZA Tree-based Orthologystem cell population maintenanceAT2G17950
GO:0010492 IEAPLAZA Tree-based Orthologymaintenance of shoot apical meristem identityAT2G17950
GO:0010078 IEAPLAZA Tree-based Orthologymaintenance of root meristem identityAT3G11260
GO:0010654 IEAPLAZA Tree-based Orthologyapical cell fate commitmentAT5G59340
GO:0048366 IEAPLAZA Tree-based Orthologyleaf developmentAT2G01500
GO:0099402 IEAPLAZA Tree-based Orthologyplant organ developmentAT2G28610
GO:0001944 IEAPLAZA Integrative Orthologyvasculature developmentAT1G46480
GO:0009908 IEAPLAZA Tree-based Orthologyflower developmentAT2G28610
GO:0048482 IEAPLAZA Tree-based Orthologyplant ovule morphogenesisAT2G01500
GO:0009947 IEAPLAZA Tree-based Orthologycentrolateral axis specificationAT2G28610
GO:0051301 IEAPLAZA Integrative Orthologycell divisionAT1G46480
GO:0009733 IEAPLAZA Tree-based Orthologyresponse to auxinAT3G11260
GO:1902459 IEAPLAZA Tree-based Orthologypositive regulation of stem cell population maintenanceAT3G11260
GO:0048314 IEAPLAZA Tree-based Orthologyembryo sac morphogenesisAT2G01500
GO:0090451 IEAPLAZA Tree-based Orthologycotyledon boundary formationAT5G59340
GO:0048437 IEAPLAZA Tree-based Orthologyfloral organ developmentAT2G01500
GO:0008284 IEAPLAZA Tree-based Orthologypositive regulation of cell proliferationAT5G59340
GO:0010087 IEAPLAZA Tree-based Orthologyphloem or xylem histogenesisAT1G20700
GO:0008283 IEAPLAZA Tree-based Orthologycell proliferationAT2G28610

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT2G17950
GO:0003700 IEAPLAZA Tree-based Orthologytranscription factor activity, sequence-specific DNA bindingAT2G28610
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT1G20700
GO:0044212 IEAPLAZA Tree-based Orthologytranscription regulatory region DNA bindingAT1G20700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G46480
GO:0048353 IEAPLAZA Tree-based Orthologyprimary endosperm nucleusAT2G01500
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT3G18010

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001356Homeobox domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.3.6.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (WOX)
No SignalP domains detected for this gene.