PLAZA 4.0 Monocots gene overview : Solyc04g078650.2

Gene: Solyc04g078650.2 (Solanum lycopersicum)

Overview

Gene Identifier: Solyc04g078650.2
Transcript Identifier: Solyc04g078650.2.1
Gene Type: Coding gene
Location: SL2.50ch04 : 63345126-63346467 : negative

Family

Gene family: HOM04M000433
(265 genes in 28 species)
specific family
Subfamily: ORTHO04M000524
(187 genes in 25 species)
specific family

Descriptions

Description: WUSCHEL-related homeobox-containing protein 4 (AHRD V1 ***- C0LAL8_9MAGN); contains Interpro domain(s) IPR001356 Homeobox

Identifiers

Type	Value
id	Solyc04g078650.2.ITAG2.4
pacid	36143340
tid	Solyc04g078650.2.1.ITAG2.4
tid	Solyc04g078650.2.1

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010067	IMP	Gene Ontology	procambium histogenesis	1
GO:0016049	IEA	PLAZA Tree-based Orthology	cell growth	AT2G01500
GO:0010865	IEA	PLAZA Tree-based Orthology	stipule development	AT2G28610
GO:0048653	IEA	PLAZA Tree-based Orthology	anther development	AT2G17950
GO:0009942	IEA	PLAZA Tree-based Orthology	longitudinal axis specification	AT5G59340
GO:0048825	IEA	PLAZA Tree-based Orthology	cotyledon development	AT5G59340
GO:0009965	IEA	PLAZA Tree-based Orthology	leaf morphogenesis	AT2G01500
GO:0009943	IEA	PLAZA Tree-based Orthology	adaxial/abaxial axis specification	AT2G28610
GO:0048446	IEA	PLAZA Tree-based Orthology	petal morphogenesis	AT2G01500
GO:0006355	IEA	PLAZA Tree-based Orthology	regulation of transcription, DNA-templated	AT2G17950
GO:0080167	IEA	PLAZA Tree-based Orthology	response to karrikin	AT5G59340
GO:0080166	IEA	PLAZA Tree-based Orthology	stomium development	AT2G17950
GO:0010072	IEA	PLAZA Tree-based Orthology	primary shoot apical meristem specification	AT1G20700
GO:0009880	IEA	PLAZA Tree-based Orthology	embryonic pattern specification	AT5G59340
GO:0007165	IEA	PLAZA Integrative Orthology	signal transduction	AT1G46480
GO:0019827	IEA	PLAZA Tree-based Orthology	stem cell population maintenance	AT2G17950
GO:0010492	IEA	PLAZA Tree-based Orthology	maintenance of shoot apical meristem identity	AT2G17950
GO:0010078	IEA	PLAZA Tree-based Orthology	maintenance of root meristem identity	AT3G11260
GO:0010654	IEA	PLAZA Tree-based Orthology	apical cell fate commitment	AT5G59340
GO:0048366	IEA	PLAZA Tree-based Orthology	leaf development	AT2G01500
GO:0099402	IEA	PLAZA Tree-based Orthology	plant organ development	AT2G28610
GO:0001944	IEA	PLAZA Integrative Orthology	vasculature development	AT1G46480
GO:0009908	IEA	PLAZA Tree-based Orthology	flower development	AT2G28610
GO:0048482	IEA	PLAZA Tree-based Orthology	plant ovule morphogenesis	AT2G01500
GO:0009947	IEA	PLAZA Tree-based Orthology	centrolateral axis specification	AT2G28610
GO:0051301	IEA	PLAZA Integrative Orthology	cell division	AT1G46480
GO:0009733	IEA	PLAZA Tree-based Orthology	response to auxin	AT3G11260
GO:1902459	IEA	PLAZA Tree-based Orthology	positive regulation of stem cell population maintenance	AT3G11260
GO:0048314	IEA	PLAZA Tree-based Orthology	embryo sac morphogenesis	AT2G01500
GO:0090451	IEA	PLAZA Tree-based Orthology	cotyledon boundary formation	AT5G59340
GO:0048437	IEA	PLAZA Tree-based Orthology	floral organ development	AT2G01500
GO:0008284	IEA	PLAZA Tree-based Orthology	positive regulation of cell proliferation	AT5G59340
GO:0010087	IEA	PLAZA Tree-based Orthology	phloem or xylem histogenesis	AT1G20700
GO:0008283	IEA	PLAZA Tree-based Orthology	cell proliferation	AT2G28610

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	IEA	InterPro	DNA binding
GO:0005515	IEA	PLAZA Tree-based Orthology	protein binding	AT2G17950
GO:0003700	IEA	PLAZA Tree-based Orthology	transcription factor activity, sequence-specific DNA binding	AT2G28610
GO:0043565	IEA	PLAZA Tree-based Orthology	sequence-specific DNA binding	AT1G20700
GO:0044212	IEA	PLAZA Tree-based Orthology	transcription regulatory region DNA binding	AT1G20700

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA	PLAZA Integrative Orthology	nucleus	AT1G46480
GO:0048353	IEA	PLAZA Tree-based Orthology	primary endosperm nucleus	AT2G01500
GO:0005829	IEA	PLAZA Tree-based Orthology	cytosol	AT3G18010

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001356	Homeobox domain
IPR009057	Homeobox domain-like

Mapman id	Description
15.5.3.6	.RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (WOX)

No SignalP domains detected for this gene.