Gene: Solyc04g072880.2 (Solanum lycopersicum)

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Gene Identifier
Solyc04g072880.2
Transcript Identifier
Solyc04g072880.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 59832373-59837486 : positive

Family

Gene family
HOM04M005236
(37 genes in 27 species)
specific family

Descriptions

Description
RNA polymerase II holoenzyme cyclin-like subunit (AHRD V1 **** SSN8_NEUCR); contains Interpro domain(s) IPR015432 Cyclin H

Identifiers

Type Value
idSolyc04g072880.2.ITAG2.4
pacid36141775
tidSolyc04g072880.2.1.ITAG2.4
tidSolyc04g072880.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009739 IDAGene Ontologyresponse to gibberellin1
GO:0007346 IDAGene Ontologyregulation of mitotic cell cycle1
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G27620
GO:0009637 IEAPLAZA Integrative Orthologyresponse to blue lightAT5G27620
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G27620
GO:0010119 IEAPLAZA Integrative Orthologyregulation of stomatal movementAT5G27620
GO:1990069 IEAPLAZA Integrative Orthologystomatal openingAT5G27620
GO:2000070 IEAPLAZA Integrative Orthologyregulation of response to water deprivationAT5G27620
GO:0072593 IEAPLAZA Integrative Orthologyreactive oxygen species metabolic processAT5G27620

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004672 IEAPLAZA Integrative Orthologyprotein kinase activityAT5G27620
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G27620

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G27620
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G27620

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013763Cyclin-like
IPR031658Cyclin, C-terminal domain 2
IPR006671Cyclin, N-terminal

Mapman id Description
13.1.1.1.5.Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCH)
14.6.3.1.2.DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.CAK kinase module.cyclin subunit
15.3.5.6.2.1.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.CAK kinase module.cyclin component
No SignalP domains detected for this gene.