Gene: Solyc04g057990.2 (Solanum lycopersicum)

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Gene Identifier
Solyc04g057990.2
Transcript Identifier
Solyc04g057990.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 55101146-55115108 : negative

Family

Gene family
HOM04M005164
(37 genes in 27 species)
specific family

Descriptions

Description
mRNA 3&apos-end-processing protein YTH1 (AHRD V1 *--- B6JVP1_SCHJY); contains Interpro domain(s) IPR000571 Zinc finger, CCCH-type

Identifiers

Type Value
idSolyc04g057990.2.ITAG2.4
pacid36141701
tidSolyc04g057990.2.1.ITAG2.4
tidSolyc04g057990.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071537 ISSGene OntologyC3HC4-type RING finger domain-mediated complex assembly1
GO:0009408 ISSGene Ontologyresponse to heat1
GO:0060149 IEAPLAZA Integrative Orthologynegative regulation of posttranscriptional gene silencingAT1G21580
GO:0043484 IEAPLAZA Integrative Orthologyregulation of RNA splicingAT1G21580

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046872 IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016607 IEAPLAZA Integrative Orthologynuclear speckAT1G21580

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000571Zinc finger, CCCH-type

Mapman id Description
16.8.1.2.4.RNA processing.RNA surveillance.exosome complex.associated co-factor activities.RNA degradation surveillance factor (SOP1)
No SignalP domains detected for this gene.