Gene: Solyc04g054480.2 (Solanum lycopersicum)

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Gene Identifier
Solyc04g054480.2
Transcript Identifier
Solyc04g054480.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 52586806-52595929 : positive

Family

Gene family
HOM04M001185
(121 genes in 27 species)
specific family
Subfamily
ORTHO04M002074
(78 genes in 27 species)
specific family

Descriptions

Description
C2 domain-containing protein-like (AHRD V1 *-*- Q67UI5_ORYSJ); contains Interpro domain(s) IPR011989 Armadillo-like helical

Identifiers

Type Value
idSolyc04g054480.2.ITAG2.4
pacid36142075
tidSolyc04g054480.2.1.ITAG2.4
tidSolyc04g054480.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000067 IEAPLAZA Integrative Orthologyregulation of root morphogenesisAT2G22125
GO:0072699 IEAPLAZA Integrative Orthologyprotein localization to cortical microtubule cytoskeletonAT2G22125
GO:0051592 IEAPLAZA Integrative Orthologyresponse to calcium ionAT2G22125
GO:0010208 IEAPLAZA Integrative Orthologypollen wall assemblyAT2G22125
GO:0051211 IEAPLAZA Integrative Orthologyanisotropic cell growthAT2G22125
GO:0052324 IEAPLAZA Tree-based Orthologyplant-type cell wall cellulose biosynthetic processAT1G77460
GO:0048868 IEAPLAZA Integrative Orthologypollen tube developmentAT2G22125
GO:0009901 IEAPLAZA Integrative Orthologyanther dehiscenceAT2G22125
GO:0030244 IEAPLAZA Integrative Orthologycellulose biosynthetic processAT2G22125
GO:0010215 IEAPLAZA Integrative Orthologycellulose microfibril organizationAT2G22125
GO:0048467 IEAPLAZA Integrative Orthologygynoecium developmentAT2G22125
GO:0009826 IEAPLAZA Tree-based Orthologyunidimensional cell growthAT1G77460
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT2G22125
GO:0009833 IEAPLAZA Integrative Orthologyplant-type primary cell wall biogenesisAT2G22125
GO:0043622 IEAPLAZA Integrative Orthologycortical microtubule organizationAT2G22125
GO:0070507 IEAPLAZA Integrative Orthologyregulation of microtubule cytoskeleton organizationAT2G22125

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0005488 IEAInterProbinding
GO:0008017 IEAPLAZA Integrative Orthologymicrotubule bindingAT2G22125

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT2G22125
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT2G22125
GO:0010330 IEAPLAZA Integrative Orthologycellulose synthase complexAT2G22125
GO:0055028 IEAPLAZA Integrative Orthologycortical microtubuleAT2G22125
GO:0036449 IEAPLAZA Integrative Orthologymicrotubule minus-endAT2G22125
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G22125
GO:0009898 IEAPLAZA Integrative Orthologycytoplasmic side of plasma membraneAT2G22125
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT2G22125

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011989Armadillo-like helical
IPR000008C2 domain
IPR000225Armadillo
IPR016024Armadillo-type fold

Mapman id Description
21.1.1.4.2.Cell wall organisation.cellulose.cellulose synthase complex (CSC).microtubule-dependent CSC insertion.regulatory protein (CSI)
No SignalP domains detected for this gene.