Gene: Solyc04g008960.2 (Solanum lycopersicum)

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Gene Identifier
Solyc04g008960.2
Transcript Identifier
Solyc04g008960.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 2559536-2560441 : positive

Family

Gene family
HOM04M000347
(319 genes in 27 species)
specific family
Subfamily
ORTHO04M000818
(139 genes in 24 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
FIP1 (AHRD V1 **-- B6U778_MAIZE); contains Interpro domain(s) IPR004182 GRAM

Identifiers

Type Value
idSolyc04g008960.2.ITAG2.4
pacid36143734
tidSolyc04g008960.2.1.ITAG2.4
tidSolyc04g008960.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0051567 IEAPLAZA Tree-based Orthologyhistone H3-K9 methylationAT2G22475
GO:0010026 IEAPLAZA Tree-based Orthologytrichome differentiationAT2G22475
GO:0010029 IEAPLAZA Tree-based Orthologyregulation of seed germinationAT5G13200
GO:0010119 IEAPLAZA Tree-based Orthologyregulation of stomatal movementAT4G40100
GO:0098755 IEAPLAZA Tree-based Orthologymaintenance of seed dormancy by absisic acidAT5G13200
GO:0009407 IEAPLAZA Tree-based Orthologytoxin catabolic processAT1G28200
GO:0009845 IEAPLAZA Tree-based Orthologyseed germinationAT5G13200
GO:0009735 IEAPLAZA Tree-based Orthologyresponse to cytokininAT1G28200
GO:0009637 IEAPLAZA Tree-based Orthologyresponse to blue lightAT4G40100
GO:0048765 IEAPLAZA Tree-based Orthologyroot hair cell differentiationAT2G22475
GO:2000030 IEAPLAZA Tree-based Orthologyregulation of response to red or far red lightAT1G28200
GO:0009793 IEAPLAZA Tree-based Orthologyembryo development ending in seed dormancyAT5G13200
GO:0010482 IEAPLAZA Tree-based Orthologyregulation of epidermal cell divisionAT2G22475

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0019899 IEAPLAZA Tree-based Orthologyenzyme bindingAT1G28200
GO:0003729 IEAPLAZA Tree-based OrthologymRNA bindingAT1G28200
GO:0004364 IEAPLAZA Tree-based Orthologyglutathione transferase activityAT1G28200

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT2G22475
GO:0048046 IEAPLAZA Tree-based OrthologyapoplastAT1G28200
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT1G28200
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastAT1G28200
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT1G28200

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011993PH domain-like
IPR004182GRAM domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.