Gene: Solyc03g119390.2 (Solanum lycopersicum)

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Gene Identifier
Solyc03g119390.2
Transcript Identifier
Solyc03g119390.2.1
Gene Type
Coding gene
Location
SL2.50ch03 : 68014647-68016064 : positive

Family

Gene family
HOM04M000054
(1357 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

Identifiers

Type Value
idSolyc03g119390.2.ITAG2.4
pacid36137075
tidSolyc03g119390.2.1.ITAG2.4
tidSolyc03g119390.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1902448 IEAPLAZA Integrative Orthologypositive regulation of shade avoidanceAT1G18400
GO:0042631 IEAPLAZA Integrative Orthologycellular response to water deprivationAT1G18400
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT1G73830
GO:0071215 IEAPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT1G18400
GO:0006351 IEAPLAZA Integrative Orthologytranscription, DNA-templatedAT1G73830
GO:0048573 IEAPLAZA Integrative Orthologyphotoperiodism, floweringAT1G18400

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAInterProprotein dimerization activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G73830
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT1G18400

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G18400
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G18400

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.1.2.1.2.External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB)
No SignalP domains detected for this gene.