Gene: Solyc03g118960.1 (Solanum lycopersicum)
Overview 
- Gene Identifier
- Solyc03g118960.1
- Transcript Identifier
- Solyc03g118960.1.1
- Gene Type
- Coding gene
- Location
- SL2.50ch03 : 67708555-67710621 : negative
Family
- Gene family
- Subfamily
- Duplication type
- Tandem duplicate
Descriptions
- Description
-
Multidrug and toxin extrusion protein 1 (AHRD V1 *--- S47A1_XENTR); contains Interpro domain(s) IPR015521 MATE family transporter related protein
Identifiers
Type | Value |
---|---|
id | Solyc03g118960.1.ITAG2.4 |
pacid | 36134048 |
tid | Solyc03g118960.1.1.ITAG2.4 |
tid | Solyc03g118960.1.1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
Create
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...all colinear gene pairs.