Gene: Solyc03g116810.2 (Solanum lycopersicum)

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Gene Identifier
Solyc03g116810.2
Transcript Identifier
Solyc03g116810.2.1
Gene Type
Coding gene
Location
SL2.50ch03 : 66074297-66081862 : positive

Family

Gene family
HOM04M000769
(170 genes in 29 species)
specific family
Subfamily
ORTHO04M002600
(67 genes in 29 species)
specific family

Descriptions

Description
Signal recognition particle protein 3 (AHRD V1 ***- D7KD74_ARALY); contains Interpro domain(s) IPR006325 Signal recognition particle, SRP54 subunit

Identifiers

Type Value
idSolyc03g116810.2.ITAG2.4
pacid36135278
tidSolyc03g116810.2.1.ITAG2.4
tidSolyc03g116810.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006614 IEAInterProSRP-dependent cotranslational protein targeting to membrane

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008312 IEAInterPro7S RNA binding
GO:0003924 IEAInterProGTPase activity
GO:0005525 IEAInterProGTP binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G49500

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0048500 IEAInterProsignal recognition particle
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G48900

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004125Signal recognition particle, SRP54 subunit, M-domain
IPR022941Signal recognition particle, SRP54 subunit
IPR006325Signal recognition particle, SRP54 subunit, eukaryotic
IPR013822Signal recognition particle, SRP54 subunit, helical bundle
IPR000897Signal recognition particle, SRP54 subunit, GTPase domain
IPR003593AAA+ ATPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
23.3.1.1.5.Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.component SRP54
No SignalP domains detected for this gene.