Gene: Solyc03g113710.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc03g113710.2
Transcript Identifier
Solyc03g113710.2.1
Gene Type
Coding gene
Location
SL2.50ch03 : 63777574-63779919 : negative

Family

Gene family
HOM04M000342
(321 genes in 28 species)
specific family
Subfamily
ORTHO04M000251
(301 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Formin 3 (AHRD V1 *-*- D0QAN4_ARATH); contains Interpro domain(s) IPR015425 Actin-binding FH2

Identifiers

Type Value
idSolyc03g113710.2.ITAG2.4
pacid36135777
tidSolyc03g113710.2.1.ITAG2.4
tidSolyc03g113710.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030036 IEAPLAZA Tree-based Orthologyactin cytoskeleton organizationAT3G25500
GO:0045010 IEAPLAZA Tree-based Orthologyactin nucleationAT5G54650
GO:0051016 IEAPLAZA Tree-based Orthologybarbed-end actin filament cappingAT3G25500
GO:0009932 IEAPLAZA Tree-based Orthologycell tip growthAT1G70140
GO:0009960 IEAPLAZA Tree-based Orthologyendosperm developmentAT5G54650
GO:0048317 IEAPLAZA Tree-based Orthologyseed morphogenesisAT5G54650
GO:0030041 IEAPLAZA Tree-based Orthologyactin filament polymerizationAT1G24150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT1G24150
GO:0051015 IEAPLAZA Tree-based Orthologyactin filament bindingAT3G25500
GO:0005522 IEAPLAZA Tree-based Orthologyprofilin bindingAT1G70140

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005819 IEAPLAZA Tree-based OrthologyspindleAT5G67470
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT3G25500
GO:0005618 IEAPLAZA Tree-based Orthologycell wallAT5G54650
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT5G54650
GO:0005911 IEAPLAZA Tree-based Orthologycell-cell junctionAT1G24150
GO:0005634 IEAPLAZA Tree-based OrthologynucleusAT5G67470
GO:0009524 IEAPLAZA Tree-based OrthologyphragmoplastAT5G54650
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT1G24150
GO:0005730 IEAPLAZA Tree-based OrthologynucleolusAT5G67470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015425Formin, FH2 domain

Mapman id Description
20.2.2.6.1.Cytoskeleton organisation.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-I formin
No SignalP domains detected for this gene.