Gene: Solyc03g112890.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc03g112890.1
Transcript Identifier
Solyc03g112890.1.1
Gene Type
Coding gene
Location
SL2.50ch03 : 63173294-63175404 : negative

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Myb family transcription factor (AHRD V1 *-*- D7M9F3_ARALY); contains Interpro domain(s) IPR015495 Myb transcription factor

Identifiers

Type Value
idSolyc03g112890.1.ITAG2.4
pacid36134489
tidSolyc03g112890.1.1.ITAG2.4
tidSolyc03g112890.1.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1904095 IEAPLAZA Integrative Orthologynegative regulation of endosperm developmentAT3G27785
GO:2000034 IEAPLAZA Integrative Orthologyregulation of seed maturationAT3G27785
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT5G40360
GO:2000014 IEAPLAZA Integrative Orthologyregulation of endosperm developmentAT5G40360
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G40360
GO:0010439 IEAPLAZA Integrative Orthologyregulation of glucosinolate biosynthetic processAT5G40360
GO:0045691 IEAPLAZA Integrative Orthologyregulation of embryo sac central cell differentiationAT4G18770
GO:0045723 IEAPLAZA Integrative Orthologypositive regulation of fatty acid biosynthetic processAT5G40360
GO:0045697 IEAPLAZA Integrative Orthologyregulation of synergid differentiationAT4G18770
GO:0009553 IEAPLAZA Integrative Orthologyembryo sac developmentAT4G18770
GO:0009960 IEAPLAZA Integrative Orthologyendosperm developmentAT5G40360
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT5G40430
GO:0045995 IEAPLAZA Integrative Orthologyregulation of embryonic developmentAT3G27785
GO:0055089 IEAPLAZA Integrative Orthologyfatty acid homeostasisAT5G40360
GO:0010183 IEAPLAZA Integrative Orthologypollen tube guidanceAT4G18770
GO:2001280 IEAPLAZA Integrative Orthologypositive regulation of unsaturated fatty acid biosynthetic processAT5G40360
GO:2000692 IEAPLAZA Integrative Orthologynegative regulation of seed maturationAT3G27785
GO:0010262 IEAPLAZA Integrative Orthologysomatic embryogenesisAT5G40360

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G40360
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT5G40360
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT4G18770

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G40360

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.