Gene: Solyc03g093560.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc03g093560.1
Transcript Identifier
Solyc03g093560.1.1
Gene Type
Coding gene
Location
SL2.50ch03 : 54945453-54946187 : negative

Family

Gene family
HOM04M000008
(3579 genes in 29 species)
specific family
Subfamily
ORTHO04M000003
(3095 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Ethylene-responsive transcription factor 2 (AHRD V1 ***- B6U860_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding

Identifiers

Type Value
idSolyc03g093560.1.ITAG2.4
pacid36136557
tidSolyc03g093560.1.1.ITAG2.4
tidSolyc03g093560.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009733 IDAGene Ontologyresponse to auxin1
GO:0010364 IDAGene Ontologyregulation of ethylene biosynthetic process1
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT5G61600
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT5G51190
GO:0001944 IEAPLAZA Integrative Orthologyvasculature developmentAT5G61600
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G61600
GO:0051301 IEAPLAZA Integrative Orthologycell divisionAT5G61600

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT5G61600
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G61600

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001471AP2/ERF domain
IPR016177DNA-binding domain

Mapman id Description
15.5.7.1.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (ERF)
No SignalP domains detected for this gene.