Gene: Solyc03g031860.2 (Solanum lycopersicum)

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Gene Identifier
Solyc03g031860.2
Transcript Identifier
Solyc03g031860.2.1
Gene Type
Coding gene
Location
SL2.50ch03 : 4326515-4329816 : positive

Family

Gene family
HOM04M001399
(105 genes in 29 species)
specific family
Subfamily
ORTHO04M001915
(82 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Phytoene synthase 1

Identifiers

Type Value
idSolyc03g031860.2.ITAG2.4
pacid36136342
tidSolyc03g031860.2.1.ITAG2.4
tidSolyc03g031860.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016117 IDAGene Ontologycarotenoid biosynthetic process1
GO:0006696 IEAInterProergosterol biosynthetic process
GO:0009058 IEAInterProbiosynthetic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004310 IEAInterProfarnesyl-diphosphate farnesyltransferase activity
GO:0051996 IEAInterProsqualene synthase activity
GO:0016740 IEAInterProtransferase activity
GO:0016765 IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046905 IEAPLAZA Integrative Orthologyphytoene synthase activityAT5G17230
GO:0016767 IEAPLAZA Integrative Orthologygeranylgeranyl-diphosphate geranylgeranyltransferase activityAT5G17230
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G17230

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G17230
GO:0010287 IEAPLAZA Integrative OrthologyplastoglobuleAT5G17230

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033904Trans-Isoprenyl Diphosphate Synthases, head-to-head
IPR008949Isoprenoid synthase domain
IPR002060Squalene/phytoene synthase
IPR019845Squalene/phytoene synthase, conserved site

Mapman id Description
9.1.6.1.1.Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene synthase (PSY)
No SignalP domains detected for this gene.