Gene: Solyc02g083140.2 (Solanum lycopersicum)

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Gene Identifier
Solyc02g083140.2
Transcript Identifier
Solyc02g083140.2.1
Gene Type
Coding gene
Location
SL2.50ch02 : 46646509-46652327 : positive

Family

Gene family
HOM04M006426
(32 genes in 28 species)
specific family

Descriptions

Description
Ribonuclease E (AHRD V1 ***- B0LV36_SOLLC); contains Interpro domain(s) IPR019793 Peroxidases heam-ligand binding site

Identifiers

Type Value
idSolyc02g083140.2.ITAG2.4
pacid36159286
tidSolyc02g083140.2.1.ITAG2.4
tidSolyc02g083140.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396 IEAInterProRNA processing
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT2G04270
GO:1901259 IEAPLAZA Integrative Orthologychloroplast rRNA processingAT2G04270
GO:0010239 IEAPLAZA Integrative Orthologychloroplast mRNA processingAT2G04270

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0004540 IEAInterProribonuclease activity
GO:0004521 IEAPLAZA Integrative Orthologyendoribonuclease activityAT2G04270
GO:0030246 IEAPLAZA Homology (enrichment)carbohydrate binding
GO:2001070 IEAPLAZA Homology (enrichment)starch binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT2G04270

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR019307RNA-binding protein AU-1/Ribonuclease E/G
IPR012340Nucleic acid-binding, OB-fold
IPR004659Ribonuclease E/G

Mapman id Description
16.12.1.3.RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (RNase E)
No SignalP domains detected for this gene.