Gene: Solyc02g078580.1 (Solanum lycopersicum)

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Gene Identifier
Solyc02g078580.1
Transcript Identifier
Solyc02g078580.1.1
Gene Type
Coding gene
Location
SL2.50ch02 : 43244818-43246755 : positive

Family

Gene family
HOM04M003581
(48 genes in 28 species)
specific family

Descriptions

Description
Paf1/RNA polymerase II complex (AHRD V1 **-- Q2U0F7_ASPOR); contains Interpro domain(s) IPR018144 Plus-3 domain, subgroup

Identifiers

Type Value
idSolyc02g078580.1.ITAG2.4
pacid36157615
tidSolyc02g078580.1.1.ITAG2.4
tidSolyc02g078580.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006368 IEAInterProtranscription elongation from RNA polymerase II promoter
GO:0016570 IEAInterProhistone modification
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT1G61040
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT1G61040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016593 IEAInterProCdc73/Paf1 complex
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G61040

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR031102RNA polymerase-associated protein Rtf1
IPR004343Plus-3 domain

Mapman id Description
15.3.6.1.3.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP5/RTF1
No SignalP domains detected for this gene.