Gene: Solyc02g069270.2 (Solanum lycopersicum)

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Gene Identifier
Solyc02g069270.2
Transcript Identifier
Solyc02g069270.2.1
Gene Type
Coding gene
Location
SL2.50ch02 : 39214064-39217971 : positive

Family

Gene family
HOM04M000162
(549 genes in 29 species)
specific family
Subfamily
ORTHO04M005103
(42 genes in 18 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

Identifiers

Type Value
idSolyc02g069270.2.ITAG2.4
pacid36158864
tidSolyc02g069270.2.1.ITAG2.4
tidSolyc02g069270.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0035195 IDAGene Ontologygene silencing by miRNA1
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT1G31280
GO:0019048 IEAPLAZA Integrative Orthologymodulation by virus of host morphology or physiologyAT1G31280
GO:0051607 IEAPLAZA Integrative Orthologydefense response to virusAT1G31290

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0005515 IEAInterProprotein binding
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT1G31280
GO:0035197 IEAPLAZA Integrative OrthologysiRNA bindingAT1G31280

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G31280
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G31280

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012337Ribonuclease H-like domain
IPR003100PAZ domain
IPR014811Argonaute, linker 1 domain
IPR032472Argonaute linker 2 domain
IPR032474Protein argonaute, N-terminal
IPR003165Piwi domain

Mapman id Description
12.5.1.15.2.Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.siRNA-binding factor (AGO2)
No SignalP domains detected for this gene.