PLAZA 4.0 Monocots gene overview : Solyc01g111880.2

Gene: Solyc01g111880.2 (Solanum lycopersicum)

Overview

Gene Identifier: Solyc01g111880.2
Transcript Identifier: Solyc01g111880.2.1
Gene Type: Coding gene
Location: SL2.50ch01 : 98042636-98050047 : negative

Family

Gene family: HOM04M000024
(1879 genes in 29 species)
specific family
Subfamily: ORTHO04M000603
(172 genes in 29 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: Tyrosine-protein kinase transforming protein Src (AHRD V1 *-** SRC_AVIST); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-like

Identifiers

Type	Value
id	Solyc01g111880.2.ITAG2.4
pacid	36141150
tid	Solyc01g111880.2.1.ITAG2.4
tid	Solyc01g111880.2.1

Toolbox

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...the orthologs using the Integrative Orthology Viewer.
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View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
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...BLAST hits against NCBIs protein database.
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Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0000165	IDA	Gene Ontology	MAPK cascade	1
GO:0006468	IEA	InterPro	protein phosphorylation
GO:0009658	IEA	PLAZA Integrative Orthology	chloroplast organization	AT4G38470

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004709	IDA	Gene Ontology	MAP kinase kinase kinase activity	1
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0004713	IEA	InterPro	protein tyrosine kinase activity
GO:0004674	IEA	PLAZA Integrative Orthology	protein serine/threonine kinase activity	AT4G38470

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	IEA	PLAZA Integrative Orthology	cytosol	AT4G38470

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002912	ACT domain
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008271	Serine/threonine-protein kinase, active site
IPR000719	Protein kinase domain
IPR020635	Tyrosine-protein kinase, catalytic domain
IPR011009	Protein kinase-like domain

Mapman id	Description
18.4.1.30	.Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (MAP3K-RAF)

No SignalP domains detected for this gene.