Gene: Solyc01g056470.1 (Solanum lycopersicum)

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Gene Identifier
Solyc01g056470.1
Transcript Identifier
Solyc01g056470.1.1
Gene Type
Coding gene
Location
SL2.50ch01 : 54316419-54317187 : positive

Family

Gene family
HOM04M001357
(108 genes in 25 species)
specific family
Subfamily
ORTHO04M002613
(67 genes in 23 species)
specific family

Descriptions

Description
Photosystem II CP43 chlorophyll apoprotein (AHRD V1 ***- B7T461_9ROSI); contains Interpro domain(s) IPR000932 Photosystem antenna protein-like

Identifiers

Type Value
idSolyc01g056470.1.ITAG2.4
pacid36138411
tidSolyc01g056470.1.1.ITAG2.4
tidSolyc01g056470.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009767 IEAInterProphotosynthetic electron transport chain
GO:0019684 IEAInterProphotosynthesis, light reaction
GO:0009769 IEAPLAZA Tree-based Orthologyphotosynthesis, light harvesting in photosystem IIATCG00270
GO:0009772 IEAPLAZA Tree-based Orthologyphotosynthetic electron transport in photosystem IIATCG00270

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016168 IEAInterProchlorophyll binding
GO:0045157 IEAPLAZA Tree-based Orthologyelectron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activityATCG00270
GO:0045156 IEAPLAZA Homology (enrichment)electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009521 IEAInterProphotosystem
GO:0016020 IEAInterPromembrane
GO:0009579 IEAPLAZA Tree-based OrthologythylakoidATCG00280
GO:0009535 IEAPLAZA Tree-based Orthologychloroplast thylakoid membraneATCG00280
GO:0010287 IEAPLAZA Tree-based OrthologyplastoglobuleATCG00280
GO:0009533 IEAPLAZA Tree-based Orthologychloroplast stromal thylakoidATCG00280
GO:0009523 IEAPLAZA Tree-based Orthologyphotosystem IIATCG00270
GO:0009534 IEAPLAZA Tree-based Orthologychloroplast thylakoidATCG00280
GO:0009539 IEAPLAZA Tree-based Orthologyphotosystem II reaction centerATCG00280
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastATCG00280

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000932Photosystem antenna protein-like

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.