Gene: Solyc01g007800.2 (Solanum lycopersicum)

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Gene Identifier
Solyc01g007800.2
Transcript Identifier
Solyc01g007800.2.1
Gene Type
Coding gene
Location
SL2.50ch01 : 1955384-1955932 : positive

Family

Gene family
HOM04M000216
(436 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Plant-specific domain TIGR01568 family protein (AHRD V1 *--- B6SZV1_MAIZE); contains Interpro domain(s) IPR006458 Protein of unknown function DUF623, plant

Identifiers

Type Value
idSolyc01g007800.2.ITAG2.4
pacid36139617
tidSolyc01g007800.2.1.ITAG2.4
tidSolyc01g007800.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010154 IDAGene Ontologyfruit development1
GO:2000652 IEAPLAZA Tree-based Orthologyregulation of secondary cell wall biogenesisAT1G06920
GO:1900457 IEAPLAZA Tree-based Orthologyregulation of brassinosteroid mediated signaling pathwayLOC_Os01g64430
GO:0009553 IEAPLAZA Tree-based Orthologyembryo sac developmentAT4G18830
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT3G52525
GO:0051510 IEAPLAZA Tree-based Orthologyregulation of unidimensional cell growthAT5G01840

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT5G01840

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030863 IEAPLAZA Tree-based Orthologycortical cytoskeletonAT4G18830
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT2G18500
GO:0005730 IEAPLAZA Tree-based OrthologynucleolusAT5G01840
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmLOC_Os01g64430
GO:0005856 IEAPLAZA Tree-based OrthologycytoskeletonAT5G01840
GO:0005634 IEAPLAZA Tree-based OrthologynucleusLOC_Os01g64430

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006458Ovate protein family, C-terminal

Mapman id Description
15.5.37.RNA biosynthesis.transcriptional regulation.transcription factor (OFP)
No SignalP domains detected for this gene.