Gene: Solyc01g007630.2 (Solanum lycopersicum)

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Gene Identifier
Solyc01g007630.2
Transcript Identifier
Solyc01g007630.2.1
Gene Type
Coding gene
Location
SL2.50ch01 : 1881470-1883260 : negative

Family

Gene family
HOM04M001788
(85 genes in 22 species)
specific family

Descriptions

Description
50S ribosomal protein L2 chloroplastic (AHRD V1 ***- A6YA71_9MAGN); contains Interpro domain(s) IPR005880 Ribosomal protein L2, bacterial-type

Identifiers

Type Value
idSolyc01g007630.2.ITAG2.4
pacid36137590
tidSolyc01g007630.2.1.ITAG2.4
tidSolyc01g007630.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412 IEAInterProtranslation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEAInterProRNA binding
GO:0003735 IEAInterProstructural constituent of ribosome
GO:0016740 IEAInterProtransferase activity
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingATCG00830

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0015934 IEAInterProlarge ribosomal subunit
GO:0005840 IEAInterProribosome
GO:0005622 IEAInterProintracellular
GO:0000311 IEAPLAZA Integrative Orthologyplastid large ribosomal subunitATCG00830

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014722Ribosomal protein L2 domain 2
IPR014726Ribosomal protein L2, domain 3
IPR005880Ribosomal protein L2, bacterial/organellar-type
IPR013025Ribosomal protein L25/L23
IPR002171Ribosomal protein L2
IPR022669Ribosomal protein L2, C-terminal
IPR022666Ribosomal Proteins L2, RNA binding domain
IPR022671Ribosomal protein L2, conserved site
IPR008991Translation protein SH3-like domain
IPR012678Ribosomal protein L23/L15e core domain
IPR012340Nucleic acid-binding, OB-fold

Mapman id Description
17.7.2.1.2.Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL2
17.7.2.1.21.Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL23
No SignalP domains detected for this gene.