Gene: Solyc01g005660.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc01g005660.1
Transcript Identifier
Solyc01g005660.1.1
Gene Type
Coding gene
Location
SL2.50ch01 : 460050-461945 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family

Descriptions

Description
Myb transcription factor (AHRD V1 **-- Q6Q789_VITVI); contains Interpro domain(s) IPR015495 Myb transcription factor

Identifiers

Type Value
idSolyc01g005660.1.ITAG2.4
pacid36139131
tidSolyc01g005660.1.1.ITAG2.4
tidSolyc01g005660.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0032880 IEAPLAZA Integrative Orthologyregulation of protein localizationAT3G27920
GO:0010090 IEAPLAZA Integrative Orthologytrichome morphogenesisAT3G13540
GO:0048765 IEAPLAZA Integrative Orthologyroot hair cell differentiationAT5G14750
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT3G27920
GO:0048629 IEAPLAZA Integrative Orthologytrichome patterningAT3G27920
GO:0009867 IEAPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT3G27920
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT5G14750
GO:0048354 IEAPLAZA Integrative Orthologymucilage biosynthetic process involved in seed coat developmentAT3G13540
GO:0045165 IEAPLAZA Integrative Orthologycell fate commitmentAT5G14750
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT3G13540
GO:0010214 IEAPLAZA Integrative Orthologyseed coat developmentAT3G13540
GO:0001708 IEAPLAZA Integrative Orthologycell fate specificationAT3G27920
GO:2000039 IEAPLAZA Integrative Orthologyregulation of trichome morphogenesisAT3G27920
GO:0010026 IEAPLAZA Integrative Orthologytrichome differentiationAT3G27920

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT3G27920
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G14750

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G14750

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.