Gene: Sobic.K043500 (Sorghum bicolor)

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Gene Identifier
Sobic.K043500
Transcript Identifier
Sobic.K043500.1
Gene Type
Coding gene
Location
super_88 : 64035-64892 : negative

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasSb0088s002210
ancestorIdentifierSobic.K043500.v2.1
ancestorIdentifierSobic.K043500.1.v2.1
idSobic.K043500.v3.1
pacid32760497
tidSobic.K043500.1.v3.1
tidSobic.K043500.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030154 IBAUniProtcell differentiation
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT3G55730
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT3G55730
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT3G09230
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT3G55730
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT2G39880
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT2G39880
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT3G55730
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT3G55730
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT3G55730

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBAUniProtnucleus
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G55730

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.