Gene: Sobic.010G173400 (Sorghum bicolor)

Overview top

Gene Identifier
Sobic.010G173400
Transcript Identifier
Sobic.010G173400.1
Gene Type
Coding gene
Location
Chr10 : 50865428-50866880 : positive

Family

Gene family
HOM04M002935
(56 genes in 22 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
weakly similar to Putative uncharacterized protein

Identifiers

Type Value
aliasSb10g022580
ancestorIdentifierSobic.010G173400.v2.1
ancestorIdentifierSobic.010G173400.1.v2.1
idSobic.010G173400.v3.1
pacid32725487
tidSobic.010G173400.1.v3.1
tidSobic.010G173400.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT4G26150
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT4G26150
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT4G26150
GO:0010255 IEAPLAZA Integrative Orthologyglucose mediated signaling pathwayAT5G56860
GO:0007623 IEAPLAZA Integrative Orthologycircadian rhythmAT4G26150
GO:0051171 IEAPLAZA Integrative Orthologyregulation of nitrogen compound metabolic processAT5G56860
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT4G26150
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT4G26150
GO:0010380 IEAPLAZA Integrative Orthologyregulation of chlorophyll biosynthetic processAT4G26150
GO:0010187 IEAPLAZA Integrative Orthologynegative regulation of seed germinationAT4G26150

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAInterProzinc ion binding
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0043565 IEAInterProsequence-specific DNA binding
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT4G26150
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G56860

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013088Zinc finger, NHR/GATA-type
IPR000679Zinc finger, GATA-type

Mapman id Description
15.5.1.3.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (GATA)
No SignalP domains detected for this gene.