Gene: Sobic.010G108600 (Sorghum bicolor)

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Gene Identifier
Sobic.010G108600
Transcript Identifier
Sobic.010G108600.1
Gene Type
Coding gene
Location
Chr10 : 10801825-10803195 : negative

Family

Gene family
HOM04M000109
(779 genes in 28 species)
specific family
Subfamily
ORTHO04M000066
(666 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
similar to Os02g0731900 protein

Identifiers

Type Value
aliasSb10g009490
ancestorIdentifierSobic.010G108600.v2.1
ancestorIdentifierSobic.010G108600.1.v2.1
idSobic.010G108600.v3.1
pacid32725030
tidSobic.010G108600.1.v3.1
tidSobic.010G108600.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152 IEAInterPrometabolic process
GO:0006633 IEAInterProfatty acid biosynthetic process
GO:0048868 IEAPLAZA Tree-based Orthologypollen tube developmentAT1G25450
GO:0010025 IEAPLAZA Tree-based Orthologywax biosynthetic processAT1G68530
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT5G49070
GO:0042335 IEAPLAZA Integrative Orthologycuticle developmentAT5G49070
GO:0000038 IEAPLAZA Integrative Orthologyvery long-chain fatty acid metabolic processAT5G49070
GO:0009826 IEAPLAZA Tree-based Orthologyunidimensional cell growthAT1G68530
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT5G49070

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0016747 IEAInterProtransferase activity, transferring acyl groups other than amino-acyl groups
GO:0009922 IEAPLAZA Tree-based Orthologyfatty acid elongase activityAT1G25450

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005783 IEAPLAZA Tree-based Orthologyendoplasmic reticulumAT1G68530

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016039Thiolase-like
IPR012392Very-long-chain 3-ketoacyl-CoA synthase
IPR013601FAE1/Type III polyketide synthase-like protein
IPR0137473-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal

Mapman id Description
5.1.6.1.1.Lipid metabolism.fatty acid biosynthesis.endoplasmic reticulum-localized fatty acid elongase (FAE) system.fatty acid elongation complex.3-ketoacyl-CoA synthase (KCS)
No SignalP domains detected for this gene.