Gene: Sobic.010G101800 (Sorghum bicolor)

Overview top

Gene Identifier
Sobic.010G101800
Transcript Identifier
Sobic.010G101800.1
Gene Type
Coding gene
Location
Chr10 : 9413013-9420902 : positive

Family

Gene family
HOM04M000225
(426 genes in 29 species)
specific family
Subfamily
ORTHO04M002344
(72 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to Os02g0738900 protein

Identifiers

Type Value
aliasSb10g008870
ancestorIdentifierSobic.010G101800.v2.1
ancestorIdentifierSobic.010G101800.1.v2.1
idSobic.010G101800.v3.1
pacid32724513
tidSobic.010G101800.1.v3.1
tidSobic.010G101800.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:2000114 IEAPLAZA Integrative Orthologyregulation of establishment of cell polarityAT1G59610
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT1G59610
GO:0072583 IEAPLAZA Integrative Orthologyclathrin-dependent endocytosisAT1G59610
GO:0006896 IEAPLAZA Integrative OrthologyGolgi to vacuole transportAT1G10290
GO:0048766 IEAPLAZA Integrative Orthologyroot hair initiationAT1G59610

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924 IEAInterProGTPase activity
GO:0005525 IEAInterProGTP binding
GO:0030276 IEAPLAZA Integrative Orthologyclathrin bindingAT1G59610
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G59610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G59610
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G10290
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G59610
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G59610
GO:0009504 IEAPLAZA Integrative Orthologycell plateAT1G59610
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G59610
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT1G10290
GO:0045334 IEAPLAZA Integrative Orthologyclathrin-coated endocytic vesicleAT1G59610
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G10290

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011993PH domain-like
IPR022812Dynamin superfamily
IPR003130Dynamin GTPase effector
IPR001849Pleckstrin homology domain
IPR000375Dynamin central domain
IPR019762Dynamin, GTPase region, conserved site
IPR020850GTPase effector domain
IPR030381Dynamin-type guanine nucleotide-binding (G) domain
IPR001401Dynamin, GTPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
22.1.7.2.Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.dynamin (DRP2)
No SignalP domains detected for this gene.