PLAZA 4.0 Monocots gene overview : Sobic.010G052200

Gene: Sobic.010G052200 (Sorghum bicolor)

Overview

Gene Identifier: Sobic.010G052200
Transcript Identifier: Sobic.010G052200.1
Gene Type: Coding gene
Location: Chr10 : 4071992-4073186 : positive

Family

Gene family: HOM04M000600
(207 genes in 29 species)
specific family
Subfamily: ORTHO04M000693
(158 genes in 27 species)
specific family

Descriptions

Description: similar to Caffeoyl-CoA O-methyltransferase 2

Identifiers

Type	Value
alias	Sb10g004540
ancestorIdentifier	Sobic.010G052200.v2.1
ancestorIdentifier	Sobic.010G052200.1.v2.1
id	Sobic.010G052200.v3.1
pacid	32724287
tid	Sobic.010G052200.1.v3.1
tid	Sobic.010G052200.1

Toolbox

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...the orthologs using the Integrative Orthology Viewer.
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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0046686	IEA	PLAZA Integrative Orthology	response to cadmium ion	AT4G34050
GO:0048316	IEA	PLAZA Integrative Orthology	seed development	AT1G67990
GO:0080088	IEA	PLAZA Integrative Orthology	spermidine hydroxycinnamate conjugate biosynthetic process	AT1G67990
GO:0009805	IEA	PLAZA Integrative Orthology	coumarin biosynthetic process	AT4G34050

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008171	IEA	InterPro	O-methyltransferase activity
GO:0080078	IEA	PLAZA Integrative Orthology	tricaffeoyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity	AT1G67990
GO:0080012	IEA	PLAZA Integrative Orthology	trihydroxyferuloyl spermidine O-methyltransferase activity	AT1G67990
GO:0080077	IEA	PLAZA Integrative Orthology	trihydroxyferuloyl spermidine:S-adenosyl-L-methionine O-methyltransferase activity	AT1G67990
GO:0080076	IEA	PLAZA Integrative Orthology	caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity	AT1G67990
GO:0042409	IEA	PLAZA Integrative Orthology	caffeoyl-CoA O-methyltransferase activity	AT4G26220

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	IEA	PLAZA Integrative Orthology	cytosol	AT4G26220

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR002935	O-methyltransferase, family 3
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase

Mapman id	Description
21.6.1.4	.Cell wall organisation.lignin.monolignol biosynthesis.caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT)

No SignalP domains detected for this gene.