Gene: Sobic.004G292900 (Sorghum bicolor)

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Gene Identifier
Sobic.004G292900
Transcript Identifier
Sobic.004G292900.1
Gene Type
Coding gene
Location
Chr04 : 63331291-63331650 : negative

Family

Gene family
HOM04M000158
(561 genes in 24 species)
specific family
Subfamily
ORTHO04M000103
(490 genes in 24 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
similar to RCc3 protein

Identifiers

Type Value
aliasSb04g032680
ancestorIdentifierSobic.004G292900.v2.1
ancestorIdentifierSobic.004G292900.1.v2.1
idSobic.004G292900.v3.1
pacid32747604
tidSobic.004G292900.1.v3.1
tidSobic.004G292900.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010102 IEAPLAZA Integrative Orthologylateral root morphogenesisAT4G12550
GO:0070417 IEAPLAZA Integrative Orthologycellular response to coldAT4G12470
GO:0006896 IEAPLAZA Integrative OrthologyGolgi to vacuole transportAT1G12090
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT4G12480
GO:0009682 IEAPLAZA Integrative Orthologyinduced systemic resistanceAT4G12480
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT4G12490
GO:0009627 IEAPLAZA Integrative Orthologysystemic acquired resistanceAT4G12470
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT4G12480
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT4G12550
GO:0009735 IEAPLAZA Tree-based Orthologyresponse to cytokininSolyc03g091010.1
GO:0009631 IEAPLAZA Integrative Orthologycold acclimationAT4G12470
GO:0006623 IEAPLAZA Integrative Orthologyprotein targeting to vacuoleAT1G12090
GO:0007034 IEAPLAZA Integrative Orthologyvacuolar transportAT1G12090
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT4G12480

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G12470
GO:0009940 IEAPLAZA Integrative Orthologyamino-terminal vacuolar sorting propeptide bindingAT1G12090
GO:0043621 IEAPLAZA Integrative Orthologyprotein self-associationAT4G12470

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT2G10940
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G12090
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT4G12480
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT1G12090
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT4G12470
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT4G12530
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastAT2G10940
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT1G12090
GO:0009707 IEAPLAZA Integrative Orthologychloroplast outer membraneAT4G12490
GO:0009535 IEAPLAZA Tree-based Orthologychloroplast thylakoid membraneAT2G45180
GO:0005770 IEAPLAZA Integrative Orthologylate endosomeAT1G12090
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT1G12090

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027923Hydrophobic seed protein
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.