Gene: Sobic.004G191901 (Sorghum bicolor)

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Gene Identifier
Sobic.004G191901
Transcript Identifier
Sobic.004G191901.1
Gene Type
Coding gene
Location
Chr04 : 54399421-54408063 : positive

Family

Gene family
HOM04M000038
(1510 genes in 29 species)
specific family
Subfamily
ORTHO04M000013
(1412 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idSobic.004G191901.v3.1
pacid32745896
tidSobic.004G191901.1.v3.1
tidSobic.004G191901.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045944 IEAInterPropositive regulation of transcription from RNA polymerase II promoter
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0048527 IEAPLAZA Integrative Orthologylateral root developmentAT2G14210
GO:0010167 IEAPLAZA Integrative Orthologyresponse to nitrateAT2G14210
GO:0048578 IEAPLAZA Integrative Orthologypositive regulation of long-day photoperiodism, floweringAT2G22630
GO:0071249 IEAPLAZA Integrative Orthologycellular response to nitrateAT2G14210
GO:0007584 IEAPLAZA Integrative Orthologyresponse to nutrientAT2G14210
GO:0048574 IEAPLAZA Integrative Orthologylong-day photoperiodism, floweringAT3G57230
GO:0010440 IEAPLAZA Integrative Orthologystomatal lineage progressionAT3G57230

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000977 IEAInterProRNA polymerase II regulatory region sequence-specific DNA binding
GO:0003677 IEAInterProDNA binding
GO:0046983 IEAInterProprotein dimerization activity
GO:0003700 IEAInterProtranscription factor activity, sequence-specific DNA binding
GO:0008134 IEAPLAZA Integrative Orthologytranscription factor bindingAT3G57230
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G57230
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT3G57230

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033896MADS MEF2-like
IPR002100Transcription factor, MADS-box
IPR002487Transcription factor, K-box

Mapman id Description
15.5.14.RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)
No SignalP domains detected for this gene.