Gene: Sobic.003G421100 (Sorghum bicolor)

Overview top

Gene Identifier
Sobic.003G421100
Transcript Identifier
Sobic.003G421100.1
Gene Type
Coding gene
Location
Chr03 : 72618365-72620304 : positive

Family

Gene family
HOM04M000398
(285 genes in 27 species)
specific family
Subfamily
ORTHO04M000318
(264 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to Cytokinin oxidase 3

Identifiers

Type Value
aliasSb03g045410
ancestorIdentifierSobic.003G421100.v2.1
ancestorIdentifierSobic.003G421100.1.v2.1
idSobic.003G421100.v3.1
pacid32730358
tidSobic.003G421100.1.v3.1
tidSobic.003G421100.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0009690 IEAInterProcytokinin metabolic process
GO:0009733 IEAPLAZA Tree-based Orthologyresponse to auxinSolyc04g080820.2
GO:0010103 IEAPLAZA Integrative Orthologystomatal complex morphogenesisAT3G63440
GO:0009735 IEAPLAZA Tree-based Orthologyresponse to cytokininSolyc12g008900.1
GO:0048507 IEAPLAZA Integrative Orthologymeristem developmentAT2G41510
GO:0009823 IEAPLAZA Integrative Orthologycytokinin catabolic processAT2G41510
GO:0022900 IEAPLAZA Tree-based Orthologyelectron transport chainLOC_Os01g10110
GO:0010229 IEAPLAZA Tree-based Orthologyinflorescence developmentLOC_Os01g10110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0050660 IEAInterProflavin adenine dinucleotide binding
GO:0003824 IEAInterProcatalytic activity
GO:0016491 IEAInterProoxidoreductase activity
GO:0019139 IEAInterProcytokinin dehydrogenase activity
GO:0016614 IEAInterProoxidoreductase activity, acting on CH-OH group of donors
GO:0008131 IEAPLAZA Tree-based Orthologyprimary amine oxidase activityAT5G56970

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT2G41510
GO:0005576 IEAPLAZA Integrative Orthologyextracellular regionAT3G63440
GO:0005788 IEAPLAZA Tree-based Orthologyendoplasmic reticulum lumenAT2G19500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016170Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
IPR016167FAD-binding, type 2, subdomain 1
IPR006094FAD linked oxidase, N-terminal
IPR015345Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
IPR006093Oxygen oxidoreductase covalent FAD-binding site
IPR016166FAD-binding, type 2
IPR016164FAD-linked oxidase-like, C-terminal

Mapman id Description
11.4.3.2.Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase
No SignalP domains detected for this gene.