Gene: Sobic.003G061300 (Sorghum bicolor)

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Gene Identifier
Sobic.003G061300
Transcript Identifier
Sobic.003G061300.1
Gene Type
Coding gene
Location
Chr03 : 5388397-5393147 : positive

Family

Gene family
HOM04M000846
(158 genes in 28 species)
specific family
Subfamily
ORTHO04M001013
(122 genes in 28 species)
specific family

Descriptions

Description
similar to Chromosome chr8 scaffold_115, whole genome shotgun sequence

Identifiers

Type Value
aliasSb03g005240
ancestorIdentifierSobic.003G061300.v2.1
ancestorIdentifierSobic.003G061300.1.v2.1
idSobic.003G061300.v3.1
pacid32729502
tidSobic.003G061300.1.v3.1
tidSobic.003G061300.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0034059 IEAPLAZA Integrative Orthologyresponse to anoxiaAT4G33070
GO:0001666 IEAPLAZA Integrative Orthologyresponse to hypoxiaAT5G54960

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030976 IEAInterProthiamine pyrophosphate binding
GO:0003824 IEAInterProcatalytic activity
GO:0000287 IEAInterPromagnesium ion binding
GO:0016831 IEAInterProcarboxy-lyase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G54960
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT4G33070

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029035DHS-like NAD/FAD-binding domain
IPR012001Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
IPR011766Thiamine pyrophosphate enzyme, C-terminal TPP-binding
IPR012000Thiamine pyrophosphate enzyme, central domain
IPR012110Thiamine pyrophosphate (TPP)-dependent enzyme
IPR029061Thiamin diphosphate-binding fold

Mapman id Description
3.11.1.1.Carbohydrate metabolism.fermentation.alcoholic fermentation.pyruvate decarboxylase
No SignalP domains detected for this gene.