Gene: Sobic.001G239900 (Sorghum bicolor)

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Gene Identifier
Sobic.001G239900
Transcript Identifier
Sobic.001G239900.1
Gene Type
Coding gene
Location
Chr01 : 24685229-24690201 : positive

Family

Gene family
HOM04M000311
(340 genes in 29 species)
specific family
Subfamily
ORTHO04M002355
(72 genes in 27 species)
specific family

Descriptions

Description
similar to Amino acid permease family protein, expressed

Identifiers

Type Value
aliasSb01g021240
ancestorIdentifierSobic.001G239900.v2.1
ancestorIdentifierSobic.001G239900.1.v2.1
idSobic.001G239900.v3.1
pacid32753817
tidSobic.001G239900.1.v3.1
tidSobic.001G239900.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0003333 IEAInterProamino acid transmembrane transport
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G36940
GO:0042744 IEAPLAZA Integrative Orthologyhydrogen peroxide catabolic processAT5G36940
GO:0006995 IEAPLAZA Integrative Orthologycellular response to nitrogen starvationAT1G58030
GO:0009648 IEAPLAZA Integrative OrthologyphotoperiodismAT1G58030
GO:0042542 IEAPLAZA Integrative Orthologyresponse to hydrogen peroxideAT5G36940
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT5G36940
GO:0045454 IEAPLAZA Integrative Orthologycell redox homeostasisAT1G58030
GO:0080144 IEAPLAZA Integrative Orthologyamino acid homeostasisAT1G58030
GO:0016036 IEAPLAZA Integrative Orthologycellular response to phosphate starvationAT1G58030
GO:0008219 IEAPLAZA Integrative Orthologycell deathAT1G58030
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT1G58030
GO:0006979 IEAPLAZA Integrative Orthologyresponse to oxidative stressAT1G58030
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT1G58030
GO:0009970 IEAPLAZA Integrative Orthologycellular response to sulfate starvationAT1G58030

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0015171 IEAInterProamino acid transmembrane transporter activity
GO:0004096 IEAPLAZA Integrative Orthologycatalase activityAT1G58030
GO:0050897 IEAPLAZA Integrative Orthologycobalt ion bindingAT1G58030
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT5G36940
GO:0015174 IEAPLAZA Integrative Orthologybasic amino acid transmembrane transporter activityAT5G36940

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G36940
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G58030
GO:0005777 IEAPLAZA Integrative OrthologyperoxisomeAT1G58030
GO:0005635 IEAPLAZA Integrative Orthologynuclear envelopeAT5G36940
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G36940
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT5G36940
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G36940
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT5G36940
GO:0010319 IEAPLAZA Integrative OrthologystromuleAT1G58030
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT5G36940
GO:0009705 IEAPLAZA Integrative Orthologyplant-type vacuole membraneAT1G58030
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G58030
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G58030
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT1G58030
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT1G58030
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G36940

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002293Amino acid/polyamine transporter I
IPR029485Cationic amino acid transporter, C-terminal

Mapman id Description
24.2.3.5.2.Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT)
No SignalP domains detected for this gene.