Gene: Sobic.001G052700 (Sorghum bicolor)

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Gene Identifier
Sobic.001G052700
Transcript Identifier
Sobic.001G052700.1
Gene Type
Coding gene
Location
Chr01 : 3885328-3894336 : negative

Family

Gene family
HOM04M002819
(58 genes in 29 species)
specific family
Subfamily
ORTHO04M003335
(56 genes in 29 species)
specific family

Descriptions

Description
similar to Chromosome chr18 scaffold_1, whole genome shotgun sequence

Identifiers

Type Value
aliasSb01g004840
ancestorIdentifierSobic.001G052700.v2.1
ancestorIdentifierSobic.001G052700.1.v2.1
idSobic.001G052700.v3.1
pacid32754057
tidSobic.001G052700.1.v3.1
tidSobic.001G052700.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015031 IEAInterProprotein transport
GO:0042147 IEAInterProretrograde transport, endosome to Golgi
GO:0006886 IEAPLAZA Integrative Orthologyintracellular protein transportAT2G17790

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008565 IEAInterProprotein transporter activity
GO:0005488 IEAInterProbinding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030904 IEAInterProretromer complex
GO:0005622 IEAPLAZA Integrative OrthologyintracellularAT2G17790
GO:0005771 IEAPLAZA Integrative Orthologymultivesicular bodyAT3G51310
GO:0010008 IEAPLAZA Integrative Orthologyendosome membraneAT2G17790
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G51310
GO:0043231 IEAPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT3G51310
GO:0005623 IEAPLAZA Integrative OrthologycellAT2G17790

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011989Armadillo-like helical
IPR005378Vacuolar protein sorting-associated protein 35
IPR016024Armadillo-type fold

Mapman id Description
22.5.5.3.1.Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.component VPS35
No SignalP domains detected for this gene.